AuthorCommitMessageCommit dateIssues
Ankit PatelAnkit Patel
99cb82f6757MPull request #998: Release: QRP 14.3.1 BugfixMerge in AD/qrp from bugfix to master * commit '4f717f178e66344dc7eb9bfd3313677246a0d94d': Release QRP 14.3.1: Update header DEV-40147: assign pxdxlength prior to assessing PX var length in lab table DEV-39868: changed disp_pre to adjusteddisp_pre to align with local code and L2 tables DEV-39866: added dth in check for proceeding with code distribution DEV-39856: added codtable to li...7 Jira issues
Ankit PatelAnkit Patel
4f717f178e6Release QRP 14.3.1: Update header
Andrew PetroneDave MartinAndrew Petrone
853b96ba4eeMPull request #996: DEV-40147: BUGFIX assign pxdxlength prior to assessing PX var length in lab tableMerge in AD/qrp from DEV-40147 to bugfix * commit 'f87f1bc75fdb745440ae79a889a278aa63575ebd': DEV-40147: assign pxdxlength prior to assessing PX var length in lab tableDEV-40147
Andrew PetroneAndrew Petrone
f87f1bc75fdDEV-40147: assign pxdxlength prior to assessing PX var length in lab tableDEV-40147
Andrew PetroneDave MartinAndrew Petrone
9e65f373b1fMPull request #974: DEV-39624: BUGFIX defensive coding when x = 1 computes zmedian of 0Merge in AD/qrp from DEV-39624 to bugfix * commit 'cee8356fa673b2e6d9c59921ec82479357510268': DEV-39624: defensive coding when x = 1 computes zmedian of 0DEV-39624
Andrew PetroneDave MartinAndrew Petrone
e93fdf4688aMPull request #988: DEV-39856: BUGFIX added codtable to list of partitioned datasets to stack, ensure all partitioned frozen datasets are deleted regardless of there are observationsMerge in AD/qrp from DEV-39856 to bugfix * commit 'bb65c6c22a8d2aba055aec0bdd9fecc87a7e9fec': DEV-39856: added codtable to list of partitioned datasets to stack, ensure all partitioned frozen datasets are deleted regardless of there are observationsDEV-39856
Andrew PetroneDave MartinAndrew Petrone
f2a7edab605MPull request #993: DEV-39868: BUGFIX changed disp_pre to adjusteddisp_pre to align with local code and L2 tablesMerge in AD/qrp from DEV-39868 to bugfix * commit '29f345f633f3e7406d2e43691a81d5b6ae73cbb0': DEV-39868: changed disp_pre to adjusteddisp_pre to align with local code and L2 tablesDEV-39868
Andrew PetroneDave MartinAndrew Petrone
7464e3ccd33MPull request #991: DEV-39866: BUGFIX add a check for death codes to proceed with code distributionMerge in AD/qrp from DEV-39866 to bugfix * commit 'a210f04b40980fd13a7913c26abdaa7533e19bb5': DEV-39866: added dth in check for proceeding with code distributionDEV-39866
Andrew PetroneDave MartinAndrew Petrone
c066cd452ecMPull request #986: DEV-39858: BUGFIX add parameter to cidadenom to select correct dataset to use for eligible member computationMerge in AD/qrp from DEV-39858 to bugfix * commit '76b593be59d4c94375615c71334bc10865c20ea3': DEV-39858: add parameter to cidadenom to select correct dataset to use for eligible member computationDEV-39858
Andrew PetroneAndrew Petrone
29f345f633fDEV-39868: changed disp_pre to adjusteddisp_pre to align with local code and L2 tablesDEV-39868
Andrew PetroneAndrew Petrone
a210f04b409DEV-39866: added dth in check for proceeding with code distributionDEV-39866
Andrew PetroneAndrew Petrone
bb65c6c22a8DEV-39856: added codtable to list of partitioned datasets to stack, ensure all partitioned frozen datasets are deleted regardless of there are observationsDEV-39856
Andrew PetroneAndrew Petrone
76b593be59dDEV-39858: add parameter to cidadenom to select correct dataset to use for eligible member computationDEV-39858
Andrew PetroneValerie CarterAndrew Petrone
0f99371e795MPull request #972: DEV-39760: BUGFIX added sort of enrollment dataset prior to merge with indata.&demtableMerge in AD/qrp from DEV-39760 to bugfix * commit 'b8194c468f352c5a515cf1c0e6ce844c23f40b26': DEV-39760: added sort of enrollment dataset prior to merge with indata.&demtableDEV-39760
Andrew PetroneAndrew Petrone
cee8356fa67DEV-39624: defensive coding when x = 1 computes zmedian of 0DEV-39624
Andrew PetroneAndrew Petrone
b8194c468f3DEV-39760: added sort of enrollment dataset prior to merge with indata.&demtableDEV-39760
Andrew PetroneAndrew Petrone
e5c92fc81e6MMerge remote-tracking branch 'origin/master' into bugfix
Ankit PatelAnkit Patel
a5ffaec544bMPull request #971: Release QRP 14.3.0Merge in AD/qrp from staging to master * commit '59c125ba17eeabf9bb2fcecc3dde77639c815104': (245 commits) Release QRP 14.3.0 DEV-39573: removed enctype/pdx from subset clause to prevent incorrect pre-exclusion of claims prior to envelope DEV-39698: do not assign risksetid to uninformative risk sets DEV-39573: fixed typo DEV-39573: added keep option for efficiency DEV-39632: added k...4 Jira issues
Ankit PatelAnkit Patel
59c125ba17eRelease QRP 14.3.0
Andrew PetroneJustin VigeantAndrew Petrone
3e93a85db52MPull request #966: DEV-39573: restrict initial extract to patIDs with an index defining claimMerge in AD/qrp from DEV-39573 to staging * commit 'adaa11f5f0871d43ead458744830787dc9f918a7': DEV-39573: removed enctype/pdx from subset clause to prevent incorrect pre-exclusion of claims prior to envelope DEV-39573: fixed typo DEV-39573: added keep option for efficiency DEV-39573: finished selection of patIDs and cleaned up header DEV-39573: fixed assignment of MI as codecat DEV...DEV-39573
Andrew PetroneAndrew Petrone
adaa11f5f08DEV-39573: removed enctype/pdx from subset clause to prevent incorrect pre-exclusion of claims prior to envelopeDEV-39573
Andrew PetroneDave MartinAndrew Petrone
c6b82e7fbb2MPull request #969: DEV-39698: do not assign risksetid to uninformative risk setsMerge in AD/qrp from DEV-39698 to staging * commit '5c460cac10924f4e95ca3008cec98dcbeba31cdc': DEV-39698: do not assign risksetid to uninformative risk setsDEV-39698
Andrew PetroneAndrew Petrone
5c460cac109DEV-39698: do not assign risksetid to uninformative risk setsDEV-39698
Andrew PetroneAndrew Petrone
78f1cdf0c34DEV-39573: fixed typoDEV-39573
Andrew PetroneDave MartinAndrew Petrone
0355fbec64eMPull request #967: DEV-39632: added keep statement for reading in concepi in ms_createmicohortsMerge in AD/qrp from DEV-39632 to staging * commit 'b1c7bbb32c8e80f22b83d6b1cf444e3ddae16a84': DEV-39632: added keep options for efficiency DEV-39632: explicitely define length of vars no longer being read in DEV-39632: added keep statement for reading in concepi in ms_createmicohortsDEV-39632
Andrew PetroneAndrew Petrone
9f3f2fc245dDEV-39573: added keep option for efficiencyDEV-39573
Andrew PetroneAndrew Petrone
b1c7bbb32c8DEV-39632: added keep options for efficiencyDEV-39632
Andrew PetroneAndrew Petrone
215a3eec628DEV-39632: explicitely define length of vars no longer being read inDEV-39632
Andrew PetroneAndrew Petrone
f7c75dd6d19DEV-39632: added keep statement for reading in concepi in ms_createmicohortsDEV-39632
Andrew PetroneAndrew Petrone
87cd9015e0eMMerge remote-tracking branch 'origin/staging' into DEV-39573DEV-39573
Andrew PetroneDave MartinAndrew Petrone
c78a123399bMPull request #964: DEV-18032: STAGING ensure all MOI exposure vars are set to missing for unexposed cohortMerge in AD/qrp from DEV-18032 to staging * commit '784c17ec96fa33ae1f959e302c6bfa8ecf6d9c3a': DEV-18032: ensure all MOI exposure vars are set to missing for unexposed cohortDEV-18032
Andrew PetroneDave MartinAndrew Petrone
f50f3eb685fMPull request #963: DEV-18032: BUGFIX ensure all MOI exposure vars are set to missing for unexposed cohortMerge in AD/qrp from DEV-18032 to bugfix * commit '784c17ec96fa33ae1f959e302c6bfa8ecf6d9c3a': DEV-18032: ensure all MOI exposure vars are set to missing for unexposed cohortDEV-18032
Andrew PetroneValerie CarterAndrew Petrone
e5931d84df5MPull request #962: DEV-39581: STAGING retain patients dropped due to followupmet=N and add back in to ensure availability for unadjusted analysisMerge in AD/qrp from DEV-39581 to staging * commit '79100d4da07148592de983bc4334bcb834db04b0': DEV-39581: restrict _tempattrition to only those eligible for adjusted analysis DEV-39581: consolidated logic so that patients without followup are retained for unadjusted analysisDEV-39581
Andrew PetroneValerie CarterAndrew Petrone
b335f314ce7MPull request #961: DEV-39581: BUGFIX retain patients dropped due to followupmet=N and add back in to ensure availability for unadjusted analysisMerge in AD/qrp from DEV-39581 to bugfix * commit '79100d4da07148592de983bc4334bcb834db04b0': DEV-39581: restrict _tempattrition to only those eligible for adjusted analysis DEV-39581: consolidated logic so that patients without followup are retained for unadjusted analysisDEV-39581
Andrew PetroneAndrew Petrone
e0054916e1cDEV-39573: finished selection of patIDs and cleaned up headerDEV-39573
Andrew PetroneAndrew Petrone
b64c5ab91aeDEV-39573: fixed assignment of MI as codecatDEV-39573
Andrew PetroneAndrew Petrone
f89d812970eDEV-39573: added restriction of labextract to ensure lab records randomly selected in baseline table are selected from same dataset for reproducibilityDEV-39573
Andrew PetroneAndrew Petrone
56f33a07d56MMerge remote-tracking branch 'origin/staging' into DEV-39573DEV-39573
Dave MartinJustin VigeantDave Martin
b55fa374c95MPull request #947: DEV-39230: ms_createclaimsfiles refactorMerge in AD/qrp from DEV-39230 to staging * commit '53ab75026a55730075092efc37becd23279ead9b': DEV-39230: fixed typo in mfu DEV-39230: restored linking meds claims on enctype but not pdx for px extract in mfu DEV-39230: fixed bug in mfu for pdx, moved encounter deletion in createclaimsfiles to logical location DEV-39230: put where statement for extraction in sql DEV-39230: Apply wher...DEV-39230
Andrew PetroneJustin VigeantAndrew Petrone
77726534debMPull request #959: DEV-39414: STAGING fixed computation of conditional event/followuptime, cleaned up codeMerge in AD/qrp from DEV-39414 to staging * commit '7592e4c224abfc66dc295e3005ff9bf33724a1f2': DEV-39414: fixed event vars, deleted commented out code after testing DEV-39414: removed FUTimeExp/FUTimeUnExp to correct conditional analysisDEV-39414
Andrew PetroneJustin VigeantAndrew Petrone
48b8da1146dMPull request #958: DEV-39414: BUGFIX fixed computation of conditional event/followuptime, cleaned up codeMerge in AD/qrp from DEV-39414 to bugfix * commit '7592e4c224abfc66dc295e3005ff9bf33724a1f2': DEV-39414: fixed event vars, deleted commented out code after testing DEV-39414: removed FUTimeExp/FUTimeUnExp to correct conditional analysisDEV-39414
Justin VigeantJustin Vigeant
53ab75026a5DEV-39230: fixed typo in mfuDEV-39230
Justin VigeantJustin Vigeant
11504f7f4fbDEV-39230: restored linking meds claims on enctype but not pdx for px extract in mfuDEV-39230
Justin VigeantJustin Vigeant
ee1c6e2fc87DEV-39230: fixed bug in mfu for pdx, moved encounter deletion in createclaimsfiles to logical locationDEV-39230
AutomationAutomation
e215d59ed9aUpdate submodule
Andrew PetroneAndrew Petrone
6644379abcbDEV-39573: added ms_subsetinitialextraction macro, cleaned up indexcritericodes dataset processingDEV-39573
Andrew PetroneValerie CarterAndrew Petrone
bf9eb2d83ffMPull request #960: DEV-39536: moved ms_cidadenom call down to after death censoring of enrollment, updated base enrollment dataset usedMerge in AD/qrp from DEV-39536 to staging * commit 'a3eeb4947e5b8a5fab6397c49743ae7c3864c658': DEV-39536: moved ms_cidadenom call down to after death censoring of enrollment, updated base enrollment dataset usedDEV-39536
Andrew PetroneAndrew Petrone
e95b53d2abeDEV-39573: expand wildcardsDEV-39573
Andrew PetroneAndrew Petrone
a807af7b4beDEV-39573: add lab to list of codecat not considered for this featureDEV-39573
Andrew PetroneAndrew Petrone
7db9f9c6460Revert "DEV-39573: reordered death and mil table extraction so that subequent restriction can be called in either combo or cidanum"This reverts commit c89c4914e0fcb056e15bd4634ddbac5b9d1001df.DEV-39573